Laurel Cooper

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Pankaj JaiswalProfessor, Botany and Plant Pathology, Oregon State UniversityVerified email at science.oregonstate.edu
Christopher J MungallLawrence Berkeley National LaboratoryVerified email at lbl.gov
Elizabeth ArnaudBioversity InternationalVerified email at cgiar.org
Barry SmithProfessor of Philosophy, Biomedical Informatics, and Computer Science, University at BuffaloVerified email at buffalo.edu
Eva HualaPhoenix BioinformaticsVerified email at phoenixbioinformatics.org
Naama MendaResearch Associate, Boyce Thompson Institute, Cornell UniversityVerified email at cornell.edu
Jaswinder SinghAssociate Professor, McGill UniversityVerified email at mcgill.ca
Sinisa TodorovicProfessor of Computer Science, Oregon State UniversityVerified email at oregonstate.edu
Daniel LangPlant Genome and Systems Biology, Helmholtz-Zentrum MünchenVerified email at helmholtz-muenchen.de
Ralf ReskiDistinguished Professor (Ordinarius) Plant Biotechnology, Faculty of Biology, University of FreiburgVerified email at biologie.uni-freiburg.de
Mary SchaefferGeneticist USDA ARS and adj professor University of MissouriVerified email at missouri.edu
Carolyn J. Lawrence-DillCollege of Agricultural Sciences, Colorado State UniversityVerified email at colostate.edu
Luca MatteisSapienza University of RomeVerified email at di.uniroma1.it
Lukas A. MuellerBoyce Thompson Institute for Plant ResearchVerified email at cornell.edu
Steven CannonUSDA-ARSVerified email at ars.usda.gov
Anika Cawthorn (formerly Oellrich)University College LondonVerified email at ucl.ac.uk
Robert HoehndorfKing Abdullah University of Science and TechnologyVerified email at kaust.edu.sa
Jack GardinerMaizeGDB Data Curator on location at the University of MissouriVerified email at missouri.edu
Jennifer KlingOregon State UniversityVerified email at oregonstate.edu
Barbara Lachenbruch and B. L. GartnerProfessor, Oregon State UniversityVerified email at oregonstate.edu

Laurel Cooper

Oregon State University

Verified email at science.oregonstate.edu

plant genomics Ontologies data standards and interoperability plant anatomy and traits plant stress biology


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
The Gene Ontology resource: enriching a GOld mine Nucleic acids research 49 (D1), D325-D334, 2021	2778	2021
The gene ontology knowledgebase in 2023 SA Aleksander, J Balhoff, S Carbon, JM Cherry, HJ Drabkin, D Ebert, ... Genetics 224 (1), iyad031, 2023	591	2023
Finding our way through phenotypes AR Deans, SE Lewis, E Huala, SS Anzaldo, M Ashburner, JP Balhoff, ... PLoS biology 13 (1), e1002033, 2015	237	2015
The plant ontology as a tool for comparative plant anatomy and genomic analyses L Cooper, RL Walls, J Elser, MA Gandolfo, DW Stevenson, B Smith, ... Plant and Cell Physiology 54 (2), e1-e1, 2013	186	2013
The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics L Cooper, A Meier, MA Laporte, JL Elser, C Mungall, BT Sinn, D Cavaliere, ... Nucleic Acids Research 46 (D1), D1168-D1180, 2017	179	2017
Ontologies as integrative tools for plant science RL Walls, B Athreya, L Cooper, J Elser, MA Gandolfo, P Jaiswal, ... American journal of botany 99 (8), 1263-1275, 2012	110	2012
An overview of the BioCreative 2012 Workshop Track III: interactive text mining task CN Arighi, B Carterette, KB Cohen, M Krallinger, WJ Wilbur, P Fey, ... Database 2013, bas056, 2013	86	2013
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture L Harper, J Campbell, EKS Cannon, S Jung, M Poelchau, R Walls, ... Database 2018, bay088, 2018	83	2018
Towards a Reference Plant Trait Ontology for Modeling Knowledge of Plant Traits and Phenotypes. E Arnaud, L Cooper, R Shrestha, N Menda, RT Nelson, L Matteis, ... KEOD, 220-225, 2012	71	2012
High-frequency Ds remobilization over multiple generations in barley facilitates gene tagging in large genome cereals J Singh, S Zhang, C Chen, L Cooper, P Bregitzer, A Sturbaum, PM Hayes, ... Plant molecular biology 62, 937-950, 2006	69	2006
An ontology approach to comparative phenomics in plants A Oellrich, RL Walls, EKS Cannon, SB Cannon, L Cooper, J Gardiner, ... Plant methods 11, 1-15, 2015	67	2015
The Plant Ontology: a Tool for Plant Genomics L Cooper, P Jaiswal Plant Bioinformatics, 89-114, 2016	65	2016
The ontologies community of practice: a CGIAR initiative for big data in agrifood systems E Arnaud, MA Laporte, S Kim, C Aubert, S Leonelli, B Miro, L Cooper, ... Patterns 1 (7), 2020	63	2020
The Plant Ontology Facilitates Comparisons of Plant Development Stages Across Species RL Walls, L Cooper, JL Elser, MA Gandolfo, CJ Mungall, B Smith, ... Frontiers in Plant Science 10, 2019	55	2019
GrainGenes: a data-rich repository for small grains genetics and genomics E Yao, VC Blake, L Cooper, CP Wight, S Michel, HB Cagirici, GR Lazo, ... Database 2022, baac034, 2022	52	2022
Mapping Ds insertions in barley using a sequence-based approach LD Cooper, L Marquez-Cedillo, J Singh, AK Sturbaum, S Zhang, ... Molecular Genetics and Genomics 272, 181-193, 2004	52	2004
Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR K Van Auken, P Fey, TZ Berardini, R Dodson, L Cooper, D Li, J Chan, Y Li, ... Database 2012, 2012	45	2012
Sequencing of 15 622 gene‐bearing BAC s clarifies the gene‐dense regions of the barley genome M Muñoz‐Amatriaín, S Lonardi, MC Luo, K Madishetty, JT Svensson, ... The Plant Journal 84 (1), 216-227, 2015	44	2015
Application of Bruchin B to pea pods results in the up-regulation of CYP93C18, a putative isoflavone synthase gene, and an increase in the level of pisatin, an isoflavone … LD Cooper, RP Doss, R Price, K Peterson, JE Oliver Journal of experimental botany 56 (414), 1229-1237, 2005	41	2005
Overview of the interactive task in BioCreative V Q Wang, S S. Abdul, L Almeida, S Ananiadou, YI Balderas-Martínez, ... Database 2016, baw119, 2016	39	2016

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